Genome Analysis

Genome analysis labs.

GitHub Wiki

• Project plan

• Analyses

  • Assembly

  • Assembly quality assessment

  • Synteny comparison

  • Annotation

  • RNA preprocessing

  • RNA mapping and counting

  • Differential analysis

  • Functional analysis (extra)

  • Deeper differential analysis (extra)

  • Comparative genomics (extra)

  • Identification of other sequences (extra)

• Questions and answers

• References

• Logs

• General thoughts